MRIQC: individual T1w report

Summary

  • BIDS filename: sub-3041_ses-1_run-01_T1w.
  • Date and time: 2022-10-21, 23:34.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5933678118164648
cnr2.2158272467026574
efc0.5481961490405055
fber1288.9463327191154
fwhmavg4.119386666666666
fwhmx4.01358
fwhmy4.56143
fwhmz3.78315
icvscsf0.18499270362589443
icvsgm0.43355429501876075
icvswm0.3814530013553448
inumed2.112168550491333
inurange0.9281646966934205
qi11.3330823236860442e-05
qi20.004250297196288075
rpvecsf36.23334186017868
rpvegm16.768255102430878
rpvewm21.934606025359464
sizex176
sizey256
sizez256
snrcsf2.879383691546829
snrgm10.84311000947707
snrtotal10.870325902475917
snrwm18.88848400640385
snrdcsf37.89268891240068
snrdgm71.13319628511064
snrdtotal66.05733688196892
snrdwm89.14612544839545
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk325.692620857754
summarybgmad7.34942629707357
summarybgmean18.775685489284974
summarybgmedian17.154951840639114
summarybgn2859087.0
summarybgp057.352122217416763
summarybgp9535.47955948859453
summarybgstdv9.876990876239194
summarycsfk34.50057044212579
summarycsfmad140.29972223289883
summarycsfmean441.7167138730288
summarycsfmedian425.0863391160965
summarycsfn14307.0
summarycsfp05264.58171340450644
summarycsfp95639.8407151289284
summarycsfstdv147.6258562614648
summarygmk0.14156951340270707
summarygmmad71.34723955810747
summarygmmean797.4625283916032
summarygmmedian797.9837500676513
summarygmn20421.0
summarygmp05677.0636187493801
summarygmp95920.3520266711712
summarygmstdv73.59182105675757
summarywmk0.6851674921500468
summarywmmad48.55576025482314
summarywmmean999.0710877452215
summarywmmedian1000.0557152554393
summarywmn168029.0
summarywmp05908.2655833289027
summarywmp951083.0455796793103
summarywmstdv52.94510343282982
tpmoverlapcsf0.14243163168430328
tpmoverlapgm0.4517647922039032
tpmoverlapwm0.48894357681274414
wm2max0.46767153751797175
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime10:38:39.542500
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.108791, 0.991259, 0.0746307, -0.00736844, 0.0742701, -0.997211]
ImageOrientationTextSag>Cor(-6.3)>Tra(-0.0)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps191
PhaseResolution1
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0351535
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber8
ShimSetting[2649, 5459, -7449, -164, -19, -619, 168, -413]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp242.249
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum8e0598d3af799818751e62a16bd41119
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.